EnhancerDB
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  3. rs11390181[chr12:50930650]
Enhancers that have rs11390181[chr12:50930650]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs11390181[chr12:50930650]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50930640 50930655 SOX21 JASPAR yes 120840136
chr12 50930642 50930653 PHOX2A JASPAR yes 120840137
chr12 50930642 50930653 PROP1 JASPAR yes 120840138
chr12 50930645 50930660 FOXP1 JASPAR yes 120840139
chr12 50930648 50930652 YY1 TRANSFAC yes 120840140
chr12 50930650 50930665 FOXP1 JASPAR yes 120840141
Genes associated with rs11390181[chr12:50930650], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More