EnhancerDB
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  3. rs113960162[chr17:40398530]
Enhancers that have rs113960162[chr17:40398530]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 40390345 40414201 enh4414
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Heart
Transcript factors that have rs113960162[chr17:40398530]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 40398525 40398535 NEUROG2 JASPAR yes 54288945
chr17 40398528 40398540 FOXI1 JASPAR yes 54288946
chr17 40398529 40398541 FOXC2 JASPAR yes 54288947
chr17 40398529 40398541 MEF2A JASPAR yes 54288948
chr17 40398530 40398541 FOXB1 JASPAR yes 54288949
chr17 40398530 40398541 FOXC1 JASPAR yes 54288950
Genes associated with rs113960162[chr17:40398530], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More