EnhancerDB
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  3. rs11396688[chr1:40509546]
Enhancers that have rs11396688[chr1:40509546]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40502505 40522915 enh266
Prostate (RWPE1) Esophagus Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Uterus Blood (Karpas-422) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs11396688[chr1:40509546]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40509541 40509562 IRF1 JASPAR yes 28311990
chr1 40509545 40509566 IRF1 JASPAR yes 28311991
chr1 40509546 40509561 FOXP1 JASPAR yes 28311992
chr1 40509546 40509567 IRF1 JASPAR yes 28311993
Genes associated with rs11396688[chr1:40509546], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More