EnhancerDB
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  3. rs113972006[chr1:178024417]
Enhancers that have rs113972006[chr1:178024417]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178015665 178033840 enh12406
Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Lung (PC-9) Esophagus Astrocyte Lung Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs113972006[chr1:178024417]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178024268 178024568 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21352403
chr1 178024269 178024559 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21352404
chr1 178024284 178024560 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21352405
chr1 178024304 178024534 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21352406
chr1 178024319 178024659 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21352407
chr1 178024342 178024521 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21352408
chr1 178024402 178024417 NR2C2 JASPAR yes 33390130
Genes associated with rs113972006[chr1:178024417], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More