EnhancerDB
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  3. rs113972836[chr1:229229749]
Enhancers that have rs113972836[chr1:229229749]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229225622 229286295 enh12760
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Ovary Esophagus Liver Blood (T-cell) Blood (OCI-LY7) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
chr1 229229415 229229758 vista5448
VISTA
Transcript factors that have rs113972836[chr1:229229749]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229228678 229232083 AR GTRD no Prostate (PC-3) 21389897
chr1 229228678 229232083 AR GTRD no Prostate (PC-3) 107877686
chr1 229228744 229232100 ZNF274 GTRD no Cervix (HeLa-S3) 21389898
chr1 229228744 229232100 ZNF274 GTRD no Cervix (HeLa-S3) 107877687
chr1 229228818 229230966 ZNF274 GTRD no Cervix (HeLa-S3) 21389899
chr1 229228818 229230966 ZNF274 GTRD no Cervix (HeLa-S3) 107877688
chr1 229228818 229232486 ZNF274 GTRD no Cervix (HeLa-S3) 21389900
chr1 229228818 229232486 ZNF274 GTRD no Cervix (HeLa-S3) 107877689
chr1 229228819 229229800 P63 GTRD no Skin (Keratinocyte) 107877690
chr1 229228830 229232022 ZBTB33 GTRD no Lung (A549) 107877691
chr1 229228836 229230038 ZNF143 GTRD no Epithelial (MCF-7) 21389901
chr1 229228836 229230038 ZNF143 GTRD no Epithelial (MCF-7) 107877692
chr1 229228852 229230474 ZBTB33 GTRD no Lung (A549) 107877693
chr1 229228864 229230358 ZNF274 GTRD no Cervix (HeLa-S3) 21389902
chr1 229228864 229230358 ZNF274 GTRD no Cervix (HeLa-S3) 107877694
chr1 229228864 229230913 ZNF274 GTRD no Cervix (HeLa-S3) 21389903
chr1 229228864 229230913 ZNF274 GTRD no Cervix (HeLa-S3) 107877695
chr1 229228872 229230315 ZNF143 GTRD no Epithelial (MCF-7) 21389904
chr1 229228872 229230315 ZNF143 GTRD no Epithelial (MCF-7) 107877696
chr1 229228877 229230213 ZNF274 GTRD no Cervix (HeLa-S3) 21389905
chr1 229228877 229230213 ZNF274 GTRD no Cervix (HeLa-S3) 107877697
chr1 229228877 229232149 ZBTB33 GTRD no Lung (A549) 107877698
chr1 229228880 229230208 ZNF143 GTRD no Epithelial (MCF-7) 21389906
chr1 229228880 229230208 ZNF143 GTRD no Epithelial (MCF-7) 107877699
chr1 229228881 229232191 ZBTB33 GTRD no Lung (A549) 107877700
chr1 229228896 229230160 ZNF274 GTRD no Cervix (HeLa-S3) 21389907
chr1 229228896 229230160 ZNF274 GTRD no Cervix (HeLa-S3) 107877701
chr1 229228899 229230130 ZNF143 GTRD no Epithelial (MCF-7) 21389908
chr1 229228899 229230130 ZNF143 GTRD no Epithelial (MCF-7) 107877702
chr1 229228899 229232080 ZNF274 GTRD no Cervix (HeLa-S3) 21389909
chr1 229228899 229232080 ZNF274 GTRD no Cervix (HeLa-S3) 107877703
chr1 229228959 229230212 ZNF274 GTRD no Cervix (HeLa-S3) 21389913
chr1 229228959 229230212 ZNF274 GTRD no Cervix (HeLa-S3) 107877707
chr1 229228986 229232108 ZNF274 GTRD no Cervix (HeLa-S3) 21389915
chr1 229228986 229232108 ZNF274 GTRD no Cervix (HeLa-S3) 107877710
chr1 229228990 229229803 ZBTB33 GTRD no Lung (A549) 107877711
chr1 229229008 229230445 ZBTB33 GTRD no Lung (A549) 107877713
chr1 229229059 229230076 ZNF143 GTRD no Epithelial (MCF-7) 21389919
chr1 229229059 229230076 ZNF143 GTRD no Epithelial (MCF-7) 107877716
chr1 229229070 229230096 ZNF274 GTRD no Cervix (HeLa-S3) 21389920
chr1 229229070 229230096 ZNF274 GTRD no Cervix (HeLa-S3) 107877718
chr1 229229097 229229767 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21389923
chr1 229229097 229229767 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107877721
chr1 229229148 229230132 ZNF274 GTRD no Cervix (HeLa-S3) 21389928
chr1 229229148 229230132 ZNF274 GTRD no Cervix (HeLa-S3) 107877726
chr1 229229197 229229777 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21389929
chr1 229229197 229229777 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107877727
chr1 229229260 229230029 ZNF274 GTRD no Blood (GM12878) 107877729
chr1 229229281 229229801 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21389930
chr1 229229281 229229801 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107877730
chr1 229229299 229229969 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21389931
chr1 229229299 229229969 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107877731
chr1 229229373 229230490 ZBTB33 GTRD no Lung (A549) 107877738
chr1 229229402 229230413 ZBTB33 GTRD no Lung (A549) 107877740
chr1 229229562 229229994 ZNF274 GTRD no Blood (GM12878) 107877743
chr1 229229576 229230308 ZBTB33 GTRD no Lung (A549) 107877744
chr1 229229582 229230453 ZBTB33 GTRD no Lung (A549) 107877745
chr1 229229588 229230351 ZBTB33 GTRD no Lung (A549) 107877746
chr1 229229601 229230944 ZNF274 GTRD no Blood (GM12878) 107877747
chr1 229229666 229230390 ZBTB33 GTRD no Lung (A549) 107877748
chr1 229229675 229229997 ZNF143 GTRD no Epithelial (MCF-7) 21389940
chr1 229229675 229229997 ZNF143 GTRD no Epithelial (MCF-7) 107877749
chr1 229229680 229230251 ZBTB33 GTRD no Lung (A549) 107877750
chr1 229229686 229230338 ZBTB33 GTRD no Lung (A549) 107877751
chr1 229229691 229230226 ZBTB33 GTRD no Lung (A549) 107877752
chr1 229229735 229230125 ZNF274 GTRD no Liver (HepG2) 21389941
chr1 229229735 229230125 ZNF274 GTRD no Liver (HepG2) 107877753
chr1 229229742 229230143 ZNF274 GTRD no Liver (HepG2) 21389942
chr1 229229742 229230143 ZNF274 GTRD no Liver (HepG2) 107877754
chr1 229229747 229230164 ZNF143 GTRD no Epithelial (MCF-7) 21389943
chr1 229229747 229230164 ZNF143 GTRD no Epithelial (MCF-7) 107877755
chr1 229229748 229229761 POU2F2 JASPAR yes 35959363
chr1 229229748 229229761 POU2F2 JASPAR yes 118475256
chr1 229229748 229229762 POU1F1 JASPAR yes 35959364
chr1 229229748 229229762 POU1F1 JASPAR yes 118475257
chr1 229229749 229229761 POU3F1 JASPAR yes 35959365
chr1 229229749 229229761 POU3F2 JASPAR yes 35959366
chr1 229229749 229229761 POU3F1 JASPAR yes 118475258
chr1 229229749 229229761 POU3F2 JASPAR yes 118475259
chr1 229229749 229229762 POU3F3 JASPAR yes 35959367
chr1 229229749 229229762 POU3F3 JASPAR yes 118475260
Genes associated with rs113972836[chr1:229229749], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More