EnhancerDB
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  3. rs11398462[chr12:46871264]
Enhancers that have rs11398462[chr12:46871264]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46859389 46872155 enh14677
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs11398462[chr12:46871264]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46871253 46871269 SOX8 JASPAR yes 120626752
chr12 46871254 46871269 FOXA1 JASPAR yes 120626753
chr12 46871255 46871267 FOXI1 JASPAR yes 120626754
chr12 46871255 46871270 FOXP1 JASPAR yes 120626755
chr12 46871256 46871267 FOXP2 JASPAR yes 120626756
chr12 46871256 46871268 FOXC2 JASPAR yes 120626757
chr12 46871256 46871270 FOXF2 JASPAR yes 120626758
chr12 46871257 46871265 FOXG1 JASPAR yes 120626759
chr12 46871257 46871265 FOXO3 JASPAR yes 120626760
chr12 46871257 46871268 FOXB1 JASPAR yes 120626761
chr12 46871257 46871268 FOXC1 JASPAR yes 120626762
chr12 46871258 46871269 FOXA1 JASPAR yes 120626763
chr12 46871259 46871274 FOXP1 JASPAR yes 120626764
chr12 46871260 46871272 FOXC2 JASPAR yes 120626765
chr12 46871262 46871266 YY1 TRANSFAC yes 120626766
Genes associated with rs11398462[chr12:46871264], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More