EnhancerDB
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  3. rs113993168[chr1:27887065]
Enhancers that have rs113993168[chr1:27887065]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs113993168[chr1:27887065]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27881821 27888089 ZNF274 GTRD no Blood (GM12878) 107802589
chr1 27882919 27893564 ZNF274 GTRD no Blood (GM12878) 107802590
chr1 27882919 27893564 ZNF274 GTRD no Blood (GM12878) 107802591
chr1 27882919 27893564 ZNF274 GTRD no Blood (GM12878) 107802592
chr1 27887059 27887069 RORA JASPAR yes 27709083
chr1 27887060 27887071 ESRRA JASPAR yes 27709084
chr1 27887060 27887071 ESRRB JASPAR yes 27709085
chr1 27887064 27887068 ESR1 TRANSFAC yes 27709086
Genes associated with rs113993168[chr1:27887065], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 28099694 28150963 + STX12 ENSG00000117758.9 28099694 212629 Esophagus 0.181364 397