EnhancerDB
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  3. rs11406642[chr5:96048837]
Enhancers that have rs11406642[chr5:96048837]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 96032985 96059484 enh8572
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Thyroid Adrenal Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Heart
Transcript factors that have rs11406642[chr5:96048837]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 96048825 96048846 IRF1 JASPAR yes 64467943
chr5 96048827 96048842 PRDM1 JASPAR yes 64467944
chr5 96048829 96048850 IRF1 JASPAR yes 64467945
chr5 96048831 96048852 IRF1 JASPAR yes 64467946
chr5 96048832 96048847 FOXP1 JASPAR yes 64467947
chr5 96048832 96048853 IRF1 JASPAR yes 64467948
chr5 96048833 96048848 STAT2 JASPAR yes 64467949
chr5 96048833 96048854 IRF1 JASPAR yes 64467950
chr5 96048834 96048849 FOXP1 JASPAR yes 64467951
chr5 96048834 96048855 IRF1 JASPAR yes 64467952
chr5 96048836 96048851 FOXP1 JASPAR yes 64467953
chr5 96048837 96048852 FOXP1 JASPAR yes 64467954
Genes associated with rs11406642[chr5:96048837], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More