EnhancerDB
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  3. rs114235225[chr1:172904400]
Enhancers that have rs114235225[chr1:172904400]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172893305 172912815 enh12378
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-MC) Esophagus Astrocyte Brain (SK-N-SH) Stomach Muscle (A673) Placenta Muscle (Myoblast) Spleen Uterus Heart
Transcript factors that have rs114235225[chr1:172904400]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172902519 172904741 ZBTB33 GTRD no Brain (SK-N-SH) 21350593
chr1 172902519 172904741 ZBTB33 GTRD no Brain (SK-N-SH) 107846314
chr1 172902664 172904493 ZBTB33 GTRD no Brain (SK-N-SH) 21350597
chr1 172902664 172904493 ZBTB33 GTRD no Brain (SK-N-SH) 107846319
chr1 172902772 172904434 ZBTB33 GTRD no Brain (SK-N-SH) 21350605
chr1 172902772 172904434 ZBTB33 GTRD no Brain (SK-N-SH) 107846328
chr1 172903024 172904482 TCF7L2 GTRD no Colon (HCT116) 107846373
chr1 172903216 172904567 TCF7L2 GTRD no Colon (HCT116) 107846426
chr1 172903344 172904590 TCF7L2 GTRD no Colon (HCT116) 107846431
chr1 172904175 172904511 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21350680
chr1 172904386 172904401 MEF2A JASPAR yes 33168516
chr1 172904398 172904414 SOX4 JASPAR yes 33168524
chr1 172904399 172904411 POU2F1 JASPAR yes 33168525
Genes associated with rs114235225[chr1:172904400], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More