EnhancerDB
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  3. rs114395859[chr17:40405158]
Enhancers that have rs114395859[chr17:40405158]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 40390345 40414201 enh4414
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Heart
Transcript factors that have rs114395859[chr17:40405158]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 40405138 40405159 IRF1 JASPAR yes 54289975
chr17 40405140 40405161 IRF1 JASPAR yes 54289976
chr17 40405144 40405165 IRF1 JASPAR yes 54289977
chr17 40405145 40405166 ZNF263 JASPAR yes 54289978
chr17 40405146 40405161 PRDM1 JASPAR yes 54289979
chr17 40405146 40405161 STAT2 JASPAR yes 54289980
chr17 40405147 40405161 SPIC JASPAR yes 54289981
chr17 40405147 40405161 STAT1 JASPAR yes 54289982
chr17 40405153 40405168 LEF1 JASPAR yes 54289983
chr17 40405154 40405168 TCF7L2 JASPAR yes 54289984
Genes associated with rs114395859[chr17:40405158], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More