EnhancerDB
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  3. rs114488454[chr16:11423220]
Enhancers that have rs114488454[chr16:11423220]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 11415474 11429815 enh3885
Astrocyte Blood (Karpas-422) Uterus Blood (T-cell) Stomach Kidney Epithelial (MCF-7) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Muscle (A673)
chr16 11422943 11423238 vista21865
VISTA
Transcript factors that have rs114488454[chr16:11423220]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 11422510 11424641 ZNF143 GTRD no Epithelial (MCF-7) 21690661
chr16 11422510 11424641 ZNF143 GTRD no Epithelial (MCF-7) 108181637
chr16 11422510 11424641 ZNF143 GTRD no Epithelial (MCF-7) 108181638
chr16 11422617 11424568 ZNF143 GTRD no Epithelial (MCF-7) 21690668
chr16 11422617 11424568 ZNF143 GTRD no Epithelial (MCF-7) 108181649
chr16 11422617 11424568 ZNF143 GTRD no Epithelial (MCF-7) 108181650
chr16 11422670 11425487 ZNF143 GTRD no Epithelial (MCF-7) 21690669
chr16 11422670 11425487 ZNF143 GTRD no Epithelial (MCF-7) 108181651
chr16 11422871 11423461 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690673
chr16 11422871 11423461 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181655
chr16 11422883 11423398 TCF7L2 GTRD no Colon (HCT116) 108181657
chr16 11422940 11423264 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108181658
chr16 11422966 11423265 ZNF143 GTRD no Epithelial (MCF-7) 21690675
chr16 11422966 11423265 ZNF143 GTRD no Epithelial (MCF-7) 108181660
chr16 11423035 11423315 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108181661
chr16 11423036 11423280 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108181662
chr16 11423048 11423298 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108181663
chr16 11423161 11424520 ZNF274 GTRD no Blood (GM12878) 21690676
chr16 11423161 11424520 ZNF274 GTRD no Blood (GM12878) 108181664
chr16 11423194 11424130 ZNF274 GTRD no Blood (GM12878) 21690677
chr16 11423194 11424130 ZNF274 GTRD no Blood (GM12878) 108181665
chr16 11423202 11424043 TCF7L2 GTRD no Colon (HCT116) 108181666
chr16 11423215 11424056 ZNF274 GTRD no Blood (GM12878) 21690678
chr16 11423215 11424056 ZNF274 GTRD no Blood (GM12878) 108181667
chr16 11423215 11424417 ZNF274 GTRD no Blood (GM12878) 21690679
chr16 11423215 11424417 ZNF274 GTRD no Blood (GM12878) 108181668
chr16 11423217 11423221 YY1 TRANSFAC yes 9506273
chr16 11423217 11423221 YY1 TRANSFAC yes 49341504
Genes associated with rs114488454[chr16:11423220], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More