EnhancerDB
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  3. rs114562052[chr1:181109965]
Enhancers that have rs114562052[chr1:181109965]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 181093745 181114755 enh791
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs114562052[chr1:181109965]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 181107215 181114093 ZNF143 GTRD no Epithelial (MCF-7) 21356118
chr1 181107215 181114093 ZNF143 GTRD no Epithelial (MCF-7) 107849439
chr1 181109362 181110022 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21356152
chr1 181109383 181109973 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21356153
chr1 181109410 181110006 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21356154
chr1 181109958 181109969 FOXA1 JASPAR yes 33558063
Genes associated with rs114562052[chr1:181109965], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More