EnhancerDB
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  3. rs114615874[chr12:52603562]
Enhancers that have rs114615874[chr12:52603562]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs114615874[chr12:52603562]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52603096 52603826 TCF7L2 GTRD no Colon (HCT116) 21546697
chr12 52603289 52603593 TCF7L2 GTRD no Colon (HCT116) 21546698
chr12 52603355 52603766 TCF7L2 GTRD no Colon (HCT116) 21546699
chr12 52603557 52603562 GATA2 JASPAR yes 120928312
Genes associated with rs114615874[chr12:52603562], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More