EnhancerDB
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  3. rs114754486[chr19:13188290]
Enhancers that have rs114754486[chr19:13188290]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13160145 13191995 enh17930
Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Muscle (A673) Heart
chr19 13188264 13188490 vista28689
VISTA
Transcript factors that have rs114754486[chr19:13188290]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13187611 13188359 TCF7L2 GTRD no Colon (HCT116) 21850676
chr19 13187611 13188359 TCF7L2 GTRD no Colon (HCT116) 108388762
chr19 13188062 13188358 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 108388763
chr19 13188095 13188662 GATA1 UCSC Txn Factor no Conserved 108388764
chr19 13188152 13188412 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108388765
chr19 13188194 13188470 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108388766
chr19 13188287 13188299 NHLH1 JASPAR yes 70808395
chr19 13188287 13188299 NHLH1 JASPAR yes 112508879
chr19 13188287 13188300 ZBTB18 JASPAR yes 70808396
chr19 13188287 13188300 ZBTB18 JASPAR yes 112508880
chr19 13188288 13188298 FIGLA JASPAR yes 70808397
chr19 13188288 13188298 MSC JASPAR yes 70808398
chr19 13188288 13188298 TFAP4 JASPAR yes 70808399
chr19 13188288 13188298 FIGLA JASPAR yes 112508881
chr19 13188288 13188298 MSC JASPAR yes 112508882
chr19 13188288 13188298 TFAP4 JASPAR yes 112508883
chr19 13188288 13188300 TAL1 JASPAR yes 70808400
chr19 13188288 13188300 TAL1 JASPAR yes 112508884
Genes associated with rs114754486[chr19:13188290], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More