EnhancerDB
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  3. rs114771833[chr3:56952030]
Enhancers that have rs114771833[chr3:56952030]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 56948005 56967995 enh7237
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs114771833[chr3:56952030]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 56952020 56952031 ESRRA JASPAR yes 2610960
chr3 56952020 56952031 ESRRB JASPAR yes 2610961
chr3 56952022 56952039 RARA JASPAR yes 2610962
chr3 56952028 56952038 RELA JASPAR yes 2610963
chr3 56952028 56952039 NFKB1 JASPAR yes 2610964
Genes associated with rs114771833[chr3:56952030], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr3 57542003 57552571 + PDE12 ENSG00000174840.8 57542003 589973 Thyroid 0.256596 3792