EnhancerDB
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  3. rs114939617[chr1:204047239]
Enhancers that have rs114939617[chr1:204047239]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204045525 204080675 enh12573
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs114939617[chr1:204047239]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204047228 204047243 TFAP2A JASPAR yes 34676649
chr1 204047231 204047242 TFAP2A JASPAR yes 34676651
chr1 204047231 204047243 TFAP2A JASPAR yes 34676652
chr1 204047231 204047243 TFAP2B JASPAR yes 34676653
chr1 204047231 204047243 TFAP2C JASPAR yes 34676654
chr1 204047232 204047241 TFAP2A JASPAR yes 34676655
Genes associated with rs114939617[chr1:204047239], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More