EnhancerDB
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  3. rs115109200[chr19:2554239]
Enhancers that have rs115109200[chr19:2554239]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2521384 2555115 enh4959
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs115109200[chr19:2554239]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2554229 2554245 ZNF143 JASPAR yes 112074033
chr19 2554233 2554244 CEBPA JASPAR yes 112074034
chr19 2554234 2554245 CEBPB JASPAR yes 112074035
Genes associated with rs115109200[chr19:2554239], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr19 3136191 3163767 + GNA15 ENSG00000060558.3 3136191 581952 Uterus 0.224917 16801