EnhancerDB
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  3. rs115116299[chr19:13143688]
Enhancers that have rs115116299[chr19:13143688]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13138760 13157647 enh17929
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs115116299[chr19:13143688]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13142055 13144205 TCF7L2 GTRD no Colon (HCT116) 21850182
chr19 13142055 13144205 TCF7L2 GTRD no Colon (HCT116) 108387507
chr19 13142775 13143908 TCF7L2 GTRD no Colon (HCT116) 21850189
chr19 13142775 13143908 TCF7L2 GTRD no Colon (HCT116) 108387519
chr19 13142935 13143744 ZNF143 GTRD no Epithelial (MCF-7) 21850195
chr19 13142935 13143744 ZNF143 GTRD no Epithelial (MCF-7) 108387529
chr19 13143019 13143688 ZNF274 GTRD no Bone Marrow (K562) 108387545
chr19 13143073 13143692 ZNF143 GTRD no Epithelial (MCF-7) 21850207
chr19 13143073 13143692 ZNF143 GTRD no Epithelial (MCF-7) 108387553
chr19 13143677 13143688 GCM1 JASPAR yes 112502850
chr19 13143679 13143688 HIC2 JASPAR yes 112502851
chr19 13143682 13143694 HES7 JASPAR yes 112502853
chr19 13143683 13143693 HEY2 JASPAR yes 112502854
Genes associated with rs115116299[chr19:13143688], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More