EnhancerDB
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  3. rs115233229[chr4:7956198]
Enhancers that have rs115233229[chr4:7956198]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 7955942 7984080 enh21353
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs115233229[chr4:7956198]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 7956186 7956199 SMAD2 JASPAR yes 88146896
chr4 7956189 7956199 TBR1 JASPAR yes 88146897
chr4 7956190 7956200 TBX21 JASPAR yes 88146898
chr4 7956191 7956199 MGA JASPAR yes 88146899
chr4 7956191 7956199 TBX15 JASPAR yes 88146900
chr4 7956191 7956199 TBX1 JASPAR yes 88146901
chr4 7956191 7956199 TBX4 JASPAR yes 88146902
chr4 7956191 7956199 TBX5 JASPAR yes 88146903
chr4 7956191 7956200 ZEB1 JASPAR yes 88146904
chr4 7956191 7956203 PKNOX1 JASPAR yes 88146905
chr4 7956191 7956203 TGIF1 JASPAR yes 88146906
chr4 7956191 7956204 ZBTB18 JASPAR yes 88146907
chr4 7956192 7956202 FIGLA JASPAR yes 88146908
chr4 7956192 7956202 ID4 JASPAR yes 88146909
chr4 7956192 7956202 TCF3 JASPAR yes 88146910
chr4 7956192 7956202 TCF4 JASPAR yes 88146911
chr4 7956193 7956202 SNAI2 JASPAR yes 88146912
chr4 7956194 7956199 USF2 TRANSFAC yes 88146913
Genes associated with rs115233229[chr4:7956198], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More