EnhancerDB
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Enhancers that have rs115241439[chr1:182140642]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 182136425 182146872 enh50089
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Large Intestine Lung (PC-9) Uterus Stomach
chr1 182140424 182140684 vista4128
VISTA
Transcript factors that have rs115241439[chr1:182140642]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 182140039 182141761 ZNF143 GTRD no Epithelial (MCF-7) 107850007
chr1 182140039 182141761 ZNF143 GTRD no Epithelial (MCF-7) 107850008
chr1 182140138 182140692 ZNF143 GTRD no Epithelial (MCF-7) 107850011
chr1 182140138 182140692 ZNF143 GTRD no Epithelial (MCF-7) 107850012
chr1 182140139 182140659 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107850013
chr1 182140139 182140659 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107850014
chr1 182140203 182140675 ZNF143 GTRD no Epithelial (MCF-7) 107850017
chr1 182140203 182140675 ZNF143 GTRD no Epithelial (MCF-7) 107850018
chr1 182140235 182140675 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21357156
chr1 182140235 182140675 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107850021
chr1 182140235 182140675 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107850022
chr1 182140311 182140767 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21357157
chr1 182140311 182140767 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107850031
chr1 182140311 182140767 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107850032
chr1 182140336 182140666 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21357158
chr1 182140336 182140666 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107850035
chr1 182140336 182140666 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107850036
chr1 182140639 182140654 RFX5 JASPAR yes 33597310
chr1 182140639 182140654 RFX5 JASPAR yes 118410111
Genes associated with rs115241439[chr1:182140642], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More