EnhancerDB
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  3. rs115260708[chr3:176863053]
Enhancers that have rs115260708[chr3:176863053]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 176855125 176871295 enh7690
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs115260708[chr3:176863053]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 176862713 176863124 RELA UCSC Txn Factor no Conserved 108531111
chr3 176863052 176863062 ALX3 JASPAR yes 7838840
chr3 176863052 176863062 GSX2 JASPAR yes 7838841
chr3 176863052 176863062 MIXL1 JASPAR yes 7838842
chr3 176863052 176863062 MNX1 JASPAR yes 7838843
chr3 176863053 176863061 ISX JASPAR yes 7838844
chr3 176863053 176863061 LHX9 JASPAR yes 7838845
chr3 176863053 176863061 LMX1B JASPAR yes 7838846
chr3 176863053 176863061 PRRX1 JASPAR yes 7838847
chr3 176863053 176863061 RAX2 JASPAR yes 7838848
chr3 176863053 176863061 SHOX JASPAR yes 7838849
chr3 176863053 176863061 UNCX JASPAR yes 7838850
Genes associated with rs115260708[chr3:176863053], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More