EnhancerDB
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  3. rs1152620[chr11:65257329]
Enhancers that have rs1152620[chr11:65257329]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 65232865 65270235 enh1826
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr11 65254704 65258394 vista291
VISTA
chr11 65256318 65257363 vista10611
VISTA
Transcript factors that have rs1152620[chr11:65257329]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 65256816 65257366 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21494010
chr11 65256816 65257366 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107979178
chr11 65256856 65257460 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21494012
chr11 65256856 65257460 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107979181
chr11 65257264 65257860 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21494016
chr11 65257264 65257860 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107979186
chr11 65257264 65257860 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107979187
chr11 65257269 65257639 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21494017
chr11 65257269 65257639 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107979188
chr11 65257269 65257639 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107979189
chr11 65257288 65257668 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21494018
chr11 65257288 65257668 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107979190
chr11 65257288 65257668 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107979191
chr11 65257289 65257649 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21494019
chr11 65257289 65257649 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107979192
chr11 65257289 65257649 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107979193
chr11 65257296 65257586 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21494020
chr11 65257296 65257586 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107979194
chr11 65257296 65257586 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107979195
chr11 65257303 65257759 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21494021
chr11 65257303 65257759 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107979196
chr11 65257303 65257759 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107979197
chr11 65257304 65257808 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21494022
chr11 65257304 65257808 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107979198
chr11 65257304 65257808 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107979199
chr11 65257309 65257699 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21494023
chr11 65257309 65257699 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107979200
chr11 65257309 65257699 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107979201
chr11 65257317 65257332 PRDM1 JASPAR yes 39322838
chr11 65257317 65257332 PRDM1 JASPAR yes 111916091
chr11 65257317 65257332 PRDM1 JASPAR yes 114086698
chr11 65257318 65257618 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21494024
chr11 65257318 65257618 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107979202
chr11 65257318 65257618 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107979203
chr11 65257324 65257640 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21494025
chr11 65257324 65257640 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107979204
chr11 65257324 65257640 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107979205
chr11 65257327 65257663 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21494026
chr11 65257327 65257663 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107979206
chr11 65257327 65257663 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107979207
Genes associated with rs1152620[chr11:65257329], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr11 65292548 65306175 + SCYL1 ENSG00000142186.12 65292548 35219 Stomach 0.242998 11071