EnhancerDB
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  3. rs115279402[chr16:87808946]
Enhancers that have rs115279402[chr16:87808946]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87806255 87830395 enh4179
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs115279402[chr16:87808946]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87805813 87809870 ZNF143 GTRD no Epithelial (MCF-7) 21733736
chr16 87805813 87809870 ZNF143 GTRD no Epithelial (MCF-7) 108219716
chr16 87807932 87811940 ZNF274 GTRD no Blood (GM12878) 21733919
chr16 87807932 87811940 ZNF274 GTRD no Blood (GM12878) 108219900
chr16 87807932 87811940 ZNF274 GTRD no Blood (GM12878) 108219901
chr16 87807932 87811940 ZNF274 GTRD no Blood (GM12878) 108219902
chr16 87807952 87811981 ZNF274 GTRD no Blood (GM12878) 21733920
chr16 87807952 87811981 ZNF274 GTRD no Blood (GM12878) 108219903
chr16 87807952 87811981 ZNF274 GTRD no Blood (GM12878) 108219904
chr16 87807952 87811981 ZNF274 GTRD no Blood (GM12878) 108219905
chr16 87808033 87811869 ZNF274 GTRD no Blood (GM12878) 21733924
chr16 87808033 87811869 ZNF274 GTRD no Blood (GM12878) 108219906
chr16 87808033 87811869 ZNF274 GTRD no Blood (GM12878) 108219907
chr16 87808033 87811869 ZNF274 GTRD no Blood (GM12878) 108219908
chr16 87808085 87811364 ZNF274 GTRD no Blood (GM12878) 21733928
chr16 87808085 87811364 ZNF274 GTRD no Blood (GM12878) 108219909
chr16 87808085 87811364 ZNF274 GTRD no Blood (GM12878) 108219910
chr16 87808271 87808995 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21733943
chr16 87808281 87811023 ZNF274 GTRD no Blood (GM12878) 21733946
chr16 87808281 87811023 ZNF274 GTRD no Blood (GM12878) 108219911
chr16 87808337 87811855 ZNF274 GTRD no Blood (GM12878) 21733954
chr16 87808337 87811855 ZNF274 GTRD no Blood (GM12878) 108219912
chr16 87808337 87811855 ZNF274 GTRD no Blood (GM12878) 108219913
chr16 87808337 87811855 ZNF274 GTRD no Blood (GM12878) 108219914
chr16 87808362 87808952 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21733956
chr16 87808378 87809062 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21733961
chr16 87808492 87809042 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21733980
chr16 87808584 87809060 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21733985
chr16 87808607 87808967 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21733988
chr16 87808708 87810992 ZNF274 GTRD no Blood (GM12878) 21733990
chr16 87808708 87810992 ZNF274 GTRD no Blood (GM12878) 108219915
chr16 87808730 87811605 STAT3 GTRD no Blood (OCI-LY7) 21733992
chr16 87808730 87811605 STAT3 GTRD no Blood (OCI-LY7) 108219916
chr16 87808730 87811605 STAT3 GTRD no Blood (OCI-LY7) 108219917
chr16 87808730 87811605 STAT3 GTRD no Blood (OCI-LY7) 108219918
chr16 87808738 87809090 ZNF274 GTRD no Blood (GM12878) 21733993
chr16 87808755 87809226 ZNF143 GTRD no Epithelial (MCF-7) 21733994
chr16 87808762 87810981 ZNF274 GTRD no Blood (GM12878) 21733995
chr16 87808762 87810981 ZNF274 GTRD no Blood (GM12878) 108219919
chr16 87808827 87809988 ZNF274 GTRD no Liver (HepG2) 21733996
chr16 87808880 87809233 ZNF143 GTRD no Epithelial (MCF-7) 21733997
chr16 87808939 87808948 NKX3-2 JASPAR yes 12237555
chr16 87808943 87808953 SP1 JASPAR yes 12237556
Genes associated with rs115279402[chr16:87808946], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More