EnhancerDB
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  3. rs115391204[chr17:78771956]
Enhancers that have rs115391204[chr17:78771956]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78745025 78774551 enh4637
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs115391204[chr17:78771956]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78771947 78771962 TFAP2A JASPAR yes 56281165
chr17 78771947 78771962 TFAP2C JASPAR yes 56281166
chr17 78771950 78771961 TFAP2A JASPAR yes 56281167
chr17 78771950 78771961 TFAP2B JASPAR yes 56281168
chr17 78771950 78771961 TFAP2C JASPAR yes 56281169
chr17 78771951 78771960 TFAP2A JASPAR yes 56281170
chr17 78771956 78771960 LFA1 TRANSFAC yes 56281171
Genes associated with rs115391204[chr17:78771956], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More