EnhancerDB
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  3. rs115414130[chr17:55505600]
Enhancers that have rs115414130[chr17:55505600]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55477469 55505815 enh4487
Brain (SK-N-MC) Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs115414130[chr17:55505600]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55505585 55505600 FOXA1 JASPAR yes 54954605
chr17 55505586 55505601 FOXP1 JASPAR yes 54954609
chr17 55505589 55505600 FOXA1 JASPAR yes 54954611
chr17 55505590 55505605 FOXP1 JASPAR yes 54954612
chr17 55505591 55505602 FOXP2 JASPAR yes 54954613
chr17 55505595 55505605 HOXA13 JASPAR yes 54954614
chr17 55505595 55505605 HOXB13 JASPAR yes 54954615
chr17 55505595 55505605 HOXC10 JASPAR yes 54954616
chr17 55505595 55505605 HOXD11 JASPAR yes 54954617
chr17 55505595 55505605 HOXD13 JASPAR yes 54954618
chr17 55505595 55505606 HOXA10 JASPAR yes 54954619
chr17 55505595 55505606 HOXC11 JASPAR yes 54954620
chr17 55505595 55505606 HOXC13 JASPAR yes 54954621
chr17 55505596 55505605 CDX1 JASPAR yes 54954622
chr17 55505596 55505607 CDX2 JASPAR yes 54954623
Genes associated with rs115414130[chr17:55505600], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More