EnhancerDB
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  3. rs115430579[chr1:21644119]
Enhancers that have rs115430579[chr1:21644119]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21624465 21668955 enh110
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr1 21643831 21644195 vista666
VISTA
Transcript factors that have rs115430579[chr1:21644119]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21644106 21644123 RARA JASPAR yes 27295356
chr1 21644106 21644123 RARA JASPAR yes 118245689
chr1 21644119 21644132 TFAP2B JASPAR yes 27295357
chr1 21644119 21644132 TFAP2C JASPAR yes 27295358
chr1 21644119 21644132 TFAP2B JASPAR yes 118245690
chr1 21644119 21644132 TFAP2C JASPAR yes 118245691
Genes associated with rs115430579[chr1:21644119], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More