EnhancerDB
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  3. rs115449601[chr5:170923954]
Enhancers that have rs115449601[chr5:170923954]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 170917733 170925475 enh22796
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Ovary Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Uterus Lung (PC-9) Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs115449601[chr5:170923954]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 170923942 170923957 HNF1A JASPAR yes 67724387
chr5 170923948 170923963 FOXP1 JASPAR yes 67724388
chr5 170923951 170923961 HOXA13 JASPAR yes 67724389
chr5 170923951 170923961 HOXB13 JASPAR yes 67724390
chr5 170923951 170923961 HOXD13 JASPAR yes 67724391
chr5 170923951 170923962 HOXA10 JASPAR yes 67724392
chr5 170923952 170923961 CDX1 JASPAR yes 67724393
chr5 170923952 170923963 CDX2 JASPAR yes 67724394
chr5 170923953 170923965 MEF2A JASPAR yes 67724395
chr5 170923953 170923965 MEF2B JASPAR yes 67724396
chr5 170923953 170923965 MEF2D JASPAR yes 67724397
Genes associated with rs115449601[chr5:170923954], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More