EnhancerDB
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  3. rs115466817[chr19:2547890]
Enhancers that have rs115466817[chr19:2547890]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2521384 2555115 enh4959
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs115466817[chr19:2547890]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2545665 2548212 ZNF274 GTRD no Liver (HepG2) 21837072
chr19 2545665 2548212 ZNF274 GTRD no Liver (HepG2) 108362370
chr19 2545710 2548076 ZNF274 GTRD no Liver (HepG2) 21837074
chr19 2545710 2548076 ZNF274 GTRD no Liver (HepG2) 108362375
chr19 2545723 2547981 ZNF274 GTRD no Liver (HepG2) 21837075
chr19 2545723 2547981 ZNF274 GTRD no Liver (HepG2) 108362377
chr19 2545769 2548050 ZNF274 GTRD no Liver (HepG2) 21837077
chr19 2545769 2548050 ZNF274 GTRD no Liver (HepG2) 108362381
chr19 2545780 2548156 ZNF274 GTRD no Liver (HepG2) 21837078
chr19 2545780 2548156 ZNF274 GTRD no Liver (HepG2) 108362383
chr19 2545837 2548153 ZNF274 GTRD no Liver (HepG2) 21837084
chr19 2545837 2548153 ZNF274 GTRD no Liver (HepG2) 108362392
chr19 2545847 2548103 ZNF274 GTRD no Liver (HepG2) 21837085
chr19 2545847 2548103 ZNF274 GTRD no Liver (HepG2) 108362393
chr19 2547884 2547894 CLOCK JASPAR yes 112072970
chr19 2547884 2547894 HEY1 JASPAR yes 112072971
chr19 2547884 2547894 HEY2 JASPAR yes 112072972
chr19 2547884 2547894 MAX JASPAR yes 112072973
chr19 2547884 2547895 USF1 JASPAR yes 112072974
chr19 2547885 2547895 MAX JASPAR yes 112072975
chr19 2547886 2547891 MYC TRANSFAC yes 112072976
chr19 2547886 2547891 USF1 TRANSFAC yes 112072977
chr19 2547886 2547891 USF2 TRANSFAC yes 112072978
chr19 2547886 2547893 USF1 JASPAR yes 112072979
Genes associated with rs115466817[chr19:2547890], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More