EnhancerDB
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  3. rs115519789[chr12:53764861]
Enhancers that have rs115519789[chr12:53764861]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53754815 53768707 enh2366
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs115519789[chr12:53764861]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53764405 53765639 POLR2A UCSC Txn Factor no Conserved 108035990
chr12 53764462 53764966 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549283
chr12 53764466 53765088 ZNF274 GTRD no Blood (GM12878) 108035991
chr12 53764475 53765315 ZNF274 GTRD no Blood (GM12878) 108035992
chr12 53764489 53765210 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549284
chr12 53764489 53765210 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108035993
chr12 53764498 53764874 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549285
chr12 53764510 53765160 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549286
chr12 53764510 53765160 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108035994
chr12 53764529 53764985 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549287
chr12 53764536 53765216 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549288
chr12 53764536 53765216 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108035995
chr12 53764536 53765220 ZNF274 GTRD no Blood (GM12878) 108035996
chr12 53764539 53765385 ZNF274 GTRD no Blood (GM12878) 108035997
chr12 53764544 53765170 ZNF274 GTRD no Blood (GM12878) 108035998
chr12 53764549 53765122 ZNF274 GTRD no Blood (GM12878) 108035999
chr12 53764551 53765119 ZNF274 GTRD no Blood (GM12878) 108036000
chr12 53764558 53765057 ZNF274 GTRD no Blood (GM12878) 108036001
chr12 53764572 53765242 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108036002
chr12 53764575 53765085 ZNF274 GTRD no Blood (GM12878) 108036003
chr12 53764579 53765174 ZNF274 GTRD no Blood (GM12878) 108036004
chr12 53764594 53764950 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549289
chr12 53764602 53765047 ZNF274 GTRD no Blood (GM12878) 108036005
chr12 53764606 53765345 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549290
chr12 53764606 53765345 TFAP2C UCSC Txn Factor no Conserved 108036006
chr12 53764606 53765345 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108036007
chr12 53764620 53764910 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549291
chr12 53764661 53765317 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21549292
chr12 53764661 53765317 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108036008
chr12 53764661 53765517 E2F1 UCSC Txn Factor no Conserved 108036009
chr12 53764666 53765042 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549293
chr12 53764666 53765042 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108036010
chr12 53764673 53765057 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108036011
chr12 53764678 53765213 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108036012
chr12 53764700 53765296 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108036013
chr12 53764709 53765285 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21549295
chr12 53764709 53765285 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108036014
chr12 53764711 53765227 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21549296
chr12 53764711 53765227 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108036015
chr12 53764726 53765123 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21549297
chr12 53764726 53765123 PHF8 UCSC Txn Factor no Conserved 108036016
chr12 53764726 53765123 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108036017
chr12 53764748 53765248 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108036018
chr12 53764762 53765142 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108036019
chr12 53764774 53765244 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21549298
chr12 53764774 53765244 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108036020
chr12 53764779 53765215 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21549299
chr12 53764779 53765215 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108036021
chr12 53764779 53765449 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108036022
chr12 53764786 53765276 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21549300
chr12 53764786 53765276 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108036023
chr12 53764792 53765072 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108036024
chr12 53764793 53765249 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549301
chr12 53764793 53765249 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108036025
chr12 53764795 53765151 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549302
chr12 53764795 53765151 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108036026
chr12 53764795 53765305 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21549303
chr12 53764795 53765305 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108036027
chr12 53764798 53765238 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21549304
chr12 53764798 53765238 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108036028
chr12 53764810 53765130 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108036029
chr12 53764816 53765121 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108036030
chr12 53764823 53765119 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 108036031
chr12 53764828 53765368 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108036032
chr12 53764828 53765379 GABPA UCSC Txn Factor no Conserved 108036033
chr12 53764833 53765172 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108036034
chr12 53764835 53765204 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21549305
chr12 53764835 53765204 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108036035
chr12 53764837 53765197 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21549306
chr12 53764837 53765197 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108036036
chr12 53764841 53765151 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108036037
chr12 53764843 53765183 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108036038
chr12 53764852 53765140 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21549307
chr12 53764852 53765140 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108036039
chr12 53764853 53765175 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108036040
chr12 53764854 53765238 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21549308
chr12 53764854 53765238 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108036041
chr12 53764857 53765104 EBF1 UCSC Txn Factor no Conserved 108036042
chr12 53764857 53765104 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108036043
chr12 53764857 53765233 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108036044
chr12 53764859 53765552 ZNF274 GTRD no Bone Marrow (K562) 21549309
chr12 53764859 53765552 ZNF274 GTRD no Bone Marrow (K562) 108036045
chr12 53764861 53765517 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21549310
chr12 53764861 53765517 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108036046
Genes associated with rs115519789[chr12:53764861], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More