EnhancerDB
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  3. rs115539400[chr1:19259606]
Enhancers that have rs115539400[chr1:19259606]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19252691 19280920 enh11566
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs115539400[chr1:19259606]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19259605 19259616 FLI1 JASPAR yes 27162709
chr1 19259606 19259616 GABPA JASPAR yes 27162710
chr1 19259606 19259619 ELF1 JASPAR yes 27162711
Genes associated with rs115539400[chr1:19259606], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More