EnhancerDB
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  3. rs115542012[chr6:33565100]
Enhancers that have rs115542012[chr6:33565100]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 33549445 33581115 enh23159
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs115542012[chr6:33565100]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 33565094 33565109 HNF1A JASPAR yes 101158922
chr6 33565096 33565107 FOXC1 JASPAR yes 101158923
chr6 33565097 33565101 YY1 TRANSFAC yes 101158924
chr6 33565098 33565113 FOXP1 JASPAR yes 101158925
Genes associated with rs115542012[chr6:33565100], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More