EnhancerDB
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  3. rs115552406[chr12:125033772]
Enhancers that have rs115552406[chr12:125033772]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125019933 125050377 enh2674
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr12 125033431 125034089 vista15293
VISTA
Transcript factors that have rs115552406[chr12:125033772]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125031996 125033858 ZNF143 GTRD no Epithelial (MCF-7) 21581013
chr12 125031996 125033858 ZNF143 GTRD no Epithelial (MCF-7) 108068905
chr12 125033448 125034044 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21581017
chr12 125033448 125034044 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108068910
chr12 125033620 125033930 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21581018
chr12 125033620 125033930 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108068911
chr12 125033764 125033778 CREB3L1 JASPAR yes 82495918
chr12 125033764 125033778 CREB3L1 JASPAR yes 124392598
chr12 125033766 125033776 MLXIPL JASPAR yes 82495919
chr12 125033766 125033776 MLX JASPAR yes 82495920
chr12 125033766 125033776 MNT JASPAR yes 82495921
chr12 125033766 125033776 TFE3 JASPAR yes 82495922
chr12 125033766 125033776 MLXIPL JASPAR yes 124392599
chr12 125033766 125033776 MLX JASPAR yes 124392600
chr12 125033766 125033776 MNT JASPAR yes 124392601
chr12 125033766 125033776 TFE3 JASPAR yes 124392602
chr12 125033767 125033777 MAX JASPAR yes 82495923
chr12 125033767 125033777 MAX JASPAR yes 124392603
chr12 125033768 125033773 MYC TRANSFAC yes 82495924
chr12 125033768 125033773 USF1 TRANSFAC yes 82495925
chr12 125033768 125033773 USF2 TRANSFAC yes 82495926
chr12 125033768 125033773 MYC TRANSFAC yes 124392604
chr12 125033768 125033773 USF1 TRANSFAC yes 124392605
chr12 125033768 125033773 USF2 TRANSFAC yes 124392606
chr12 125033768 125033775 USF1 JASPAR yes 82495927
chr12 125033768 125033775 USF1 JASPAR yes 124392607
chr12 125033772 125033784 HES5 JASPAR yes 82495928
chr12 125033772 125033784 HES7 JASPAR yes 82495929
chr12 125033772 125033784 PKNOX2 JASPAR yes 82495930
chr12 125033772 125033784 HES5 JASPAR yes 124392608
chr12 125033772 125033784 HES7 JASPAR yes 124392609
chr12 125033772 125033784 PKNOX2 JASPAR yes 124392610
Genes associated with rs115552406[chr12:125033772], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More