EnhancerDB
  1. Home
  2. SNP
  3. rs115561380[chr1:2190690]
Enhancers that have rs115561380[chr1:2190690]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2162230 2193653 enh11423
Bone Marrow (K562) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs115561380[chr1:2190690]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2188814 2190965 TCF7L2 GTRD no Colon (HCT116) 107801816
chr1 2190684 2190692 TBX15 JASPAR yes 26228439
chr1 2190684 2190692 TBX4 JASPAR yes 26228440
chr1 2190684 2190697 SMAD2 JASPAR yes 26228441
Genes associated with rs115561380[chr1:2190690], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More