EnhancerDB
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  3. rs115591659[chr1:178904534]
Enhancers that have rs115591659[chr1:178904534]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178892945 178926835 enh769
Epithelial (MCF-7) Large Intestine Ovary Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Placenta Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs115591659[chr1:178904534]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178903802 178904770 ZNF143 GTRD no Epithelial (MCF-7) 21352974
chr1 178903802 178904770 ZNF143 GTRD no Epithelial (MCF-7) 107847447
chr1 178903828 178904704 ZNF143 GTRD no Epithelial (MCF-7) 21352975
chr1 178903828 178904704 ZNF143 GTRD no Epithelial (MCF-7) 107847448
chr1 178903892 178904559 ZNF143 GTRD no Epithelial (MCF-7) 21352976
chr1 178903892 178904559 ZNF143 GTRD no Epithelial (MCF-7) 107847449
chr1 178903983 178904739 ZNF143 GTRD no Epithelial (MCF-7) 21352979
chr1 178904015 178904649 ZNF143 GTRD no Epithelial (MCF-7) 21352981
chr1 178904080 178904536 ZNF143 GTRD no Epithelial (MCF-7) 21352983
chr1 178904085 178904608 ZNF143 GTRD no Epithelial (MCF-7) 21352984
chr1 178904526 178904537 PHOX2A JASPAR yes 33454543
Genes associated with rs115591659[chr1:178904534], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More