EnhancerDB
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  3. rs115609657[chr1:25051823]
Enhancers that have rs115609657[chr1:25051823]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 25051605 25051987 vista793
VISTA
Transcript factors that have rs115609657[chr1:25051823]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25051818 25051829 ESRRA JASPAR yes 27523505
chr1 25051818 25051829 ESRRB JASPAR yes 27523506
chr1 25051818 25051829 ESRRA JASPAR yes 118251697
chr1 25051818 25051829 ESRRB JASPAR yes 118251698
chr1 25051818 25051831 NR2F1 JASPAR yes 27523507
chr1 25051818 25051831 NR2F1 JASPAR yes 118251699
chr1 25051820 25051828 NR4A2 JASPAR yes 27523508
chr1 25051820 25051828 NR4A2 JASPAR yes 118251700
chr1 25051822 25051826 ESR1 TRANSFAC yes 27523509
chr1 25051822 25051826 ESR1 TRANSFAC yes 118251701
Genes associated with rs115609657[chr1:25051823], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More