EnhancerDB
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  3. rs115633312[chr1:54836390]
Enhancers that have rs115633312[chr1:54836390]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54820685 54854719 enh11867
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Blood (GM12878) Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs115633312[chr1:54836390]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54836380 54836390 GSC2 JASPAR yes 28979011
chr1 54836380 54836390 GSC JASPAR yes 28979012
chr1 54836381 54836390 PITX3 JASPAR yes 28979014
Genes associated with rs115633312[chr1:54836390], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More