EnhancerDB
  1. Home
  2. SNP
  3. rs115655201[chr17:62163858]
Enhancers that have rs115655201[chr17:62163858]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62157225 62175223 enh17290
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs115655201[chr17:62163858]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62159832 62166447 ZNF143 GTRD no Epithelial (MCF-7) 21778613
chr17 62159832 62166447 ZNF143 GTRD no Epithelial (MCF-7) 108282222
chr17 62160289 62166431 ZNF143 GTRD no Epithelial (MCF-7) 21778614
chr17 62160289 62166431 ZNF143 GTRD no Epithelial (MCF-7) 108282223
chr17 62160339 62166409 ZNF143 GTRD no Epithelial (MCF-7) 21778615
chr17 62160339 62166409 ZNF143 GTRD no Epithelial (MCF-7) 108282224
chr17 62161268 62167143 ZNF143 GTRD no Epithelial (MCF-7) 21778623
chr17 62161268 62167143 ZNF143 GTRD no Epithelial (MCF-7) 108282232
chr17 62163849 62163860 RUNX1 JASPAR yes 55275768
chr17 62163856 62163871 FOXA1 JASPAR yes 55275769
chr17 62163857 62163872 FOXP1 JASPAR yes 55275770
chr17 62163858 62163869 FOXP2 JASPAR yes 55275771
chr17 62163858 62163870 FOXC2 JASPAR yes 55275772
chr17 62163858 62163872 FOXF2 JASPAR yes 55275773
Genes associated with rs115655201[chr17:62163858], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More