EnhancerDB
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  3. rs115668527[chr1:16488546]
Enhancers that have rs115668527[chr1:16488546]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs115668527[chr1:16488546]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16488540 16488554 FOXF2 JASPAR yes 27029366
chr1 16488542 16488554 FOXC2 JASPAR yes 27029367
chr1 16488542 16488558 POU4F2 JASPAR yes 27029368
chr1 16488542 16488558 POU4F3 JASPAR yes 27029369
chr1 16488543 16488555 FOXI1 JASPAR yes 27029370
chr1 16488544 16488558 POU4F1 JASPAR yes 27029371
Genes associated with rs115668527[chr1:16488546], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More