EnhancerDB
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  3. rs115729439[chr16:87884364]
Enhancers that have rs115729439[chr16:87884364]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87873744 87902035 enh4182
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs115729439[chr16:87884364]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87883470 87890813 POLR2A UCSC Txn Factor no Conserved 108221259
chr16 87883470 87890813 POLR2A UCSC Txn Factor no Conserved 108221260
chr16 87883470 87890813 POLR2A UCSC Txn Factor no Conserved 108221261
chr16 87884344 87884365 REST JASPAR yes 12246967
chr16 87884349 87884369 ESR1 JASPAR yes 12246971
chr16 87884352 87884370 ESR2 JASPAR yes 12246973
chr16 87884353 87884368 AR JASPAR yes 12246974
chr16 87884353 87884370 NR3C1 JASPAR yes 12246975
chr16 87884353 87884370 NR3C2 JASPAR yes 12246976
chr16 87884353 87884371 ESR2 JASPAR yes 12246977
chr16 87884354 87884369 ESR2 JASPAR yes 12246978
chr16 87884354 87884374 ESR1 JASPAR yes 12246979
chr16 87884355 87884370 AR JASPAR yes 12246980
Genes associated with rs115729439[chr16:87884364], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More