EnhancerDB
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  3. rs11579280[chr1:16519915]
Enhancers that have rs11579280[chr1:16519915]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs11579280[chr1:16519915]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16519905 16519920 MEF2C JASPAR yes 27034286
chr1 16519906 16519918 POU3F1 JASPAR yes 27034287
chr1 16519906 16519918 POU3F2 JASPAR yes 27034288
chr1 16519906 16519919 POU3F3 JASPAR yes 27034289
chr1 16519906 16519921 MEF2A JASPAR yes 27034290
chr1 16519907 16519919 POU2F1 JASPAR yes 27034291
Genes associated with rs11579280[chr1:16519915], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More