EnhancerDB
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  3. rs115797538[chr1:19257000]
Enhancers that have rs115797538[chr1:19257000]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19252691 19280920 enh11566
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs115797538[chr1:19257000]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19256995 19257013 MAFF JASPAR yes 27162361
chr1 19256996 19257011 MAFK JASPAR yes 27162362
chr1 19257000 19257011 NRL JASPAR yes 27162363
Genes associated with rs115797538[chr1:19257000], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 19197926 19229275 - ALDH4A1 ENSG00000159423.12 19229275 27725 Spleen 0.436964 254