EnhancerDB
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  3. rs11580040[chr1:155198222]
Enhancers that have rs11580040[chr1:155198222]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 155186185 155200282 enh647
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs11580040[chr1:155198222]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 155196818 155198784 ZNF143 GTRD no Epithelial (MCF-7) 21341511
chr1 155198210 155198222 PKNOX1 JASPAR yes 32337189
chr1 155198210 155198222 TGIF1 JASPAR yes 32337190
chr1 155198210 155198222 TGIF2 JASPAR yes 32337191
Genes associated with rs11580040[chr1:155198222], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More