EnhancerDB
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  3. rs115804768[chr12:52549920]
Enhancers that have rs115804768[chr12:52549920]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52531174 52553795 enh2357
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs115804768[chr12:52549920]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52549909 52549924 FOXA1 JASPAR yes 120923135
chr12 52549913 52549924 FOXA1 JASPAR yes 120923136
chr12 52549916 52549930 TCF7L2 JASPAR yes 120923137
chr12 52549919 52549925 LEF1 TRANSFAC yes 120923138
chr12 52549919 52549925 TCF4 TRANSFAC yes 120923139
Genes associated with rs115804768[chr12:52549920], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More