EnhancerDB
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  3. rs115820416[chr2:99077527]
Enhancers that have rs115820416[chr2:99077527]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 99062965 99109835 enh5721
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 99077455 99077668 vista32411
VISTA
Transcript factors that have rs115820416[chr2:99077527]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 99077082 99077577 RUNX3 UCSC Txn Factor no Conserved 108433274
chr2 99077287 99078094 POLR2A UCSC Txn Factor no Conserved 108433275
chr2 99077510 99077527 RARA JASPAR yes 22097396
chr2 99077510 99077527 RXRA JASPAR yes 22097397
chr2 99077510 99077527 RARA JASPAR yes 75656949
chr2 99077510 99077527 RXRA JASPAR yes 75656950
chr2 99077517 99077530 NR2F1 JASPAR yes 22097399
chr2 99077517 99077530 NR2F1 JASPAR yes 75656952
chr2 99077518 99077532 ATF7 JASPAR yes 22097400
chr2 99077518 99077532 ATF7 JASPAR yes 75656953
chr2 99077519 99077531 JDP2 JASPAR yes 22097401
chr2 99077519 99077531 JDP2 JASPAR yes 75656954
chr2 99077520 99077528 NR4A2 JASPAR yes 22097402
chr2 99077520 99077528 NR4A2 JASPAR yes 75656955
chr2 99077520 99077533 JUN JASPAR yes 22097403
chr2 99077520 99077533 JUN JASPAR yes 75656956
chr2 99077521 99077529 CREB1 JASPAR yes 22097404
chr2 99077521 99077529 CREB1 JASPAR yes 75656957
Genes associated with rs115820416[chr2:99077527], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More