EnhancerDB
  1. Home
  2. SNP
  3. rs115827998[chr16:87816400]
Enhancers that have rs115827998[chr16:87816400]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87806255 87830395 enh4179
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs115827998[chr16:87816400]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87814847 87816551 ZNF274 GTRD no Liver (HepG2) 21734423
chr16 87815129 87817005 ZNF143 GTRD no Epithelial (MCF-7) 21734424
chr16 87815140 87817013 ZNF143 GTRD no Epithelial (MCF-7) 21734425
chr16 87815484 87816538 ZNF274 GTRD no Liver (HepG2) 21734443
chr16 87816399 87816403 YY1 TRANSFAC yes 12238784
Genes associated with rs115827998[chr16:87816400], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More