EnhancerDB
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  3. rs115878524[chr17:57449738]
Enhancers that have rs115878524[chr17:57449738]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57433402 57461748 enh17258
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs115878524[chr17:57449738]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57443070 57450073 ZNF143 GTRD no Epithelial (MCF-7) 21774797
chr17 57443070 57450073 ZNF143 GTRD no Epithelial (MCF-7) 108275852
chr17 57443070 57450073 ZNF143 GTRD no Epithelial (MCF-7) 108275853
chr17 57449728 57449738 ALX3 JASPAR yes 55053818
chr17 57449728 57449738 EN2 JASPAR yes 55053819
chr17 57449728 57449738 ESX1 JASPAR yes 55053820
chr17 57449728 57449738 GBX1 JASPAR yes 55053821
chr17 57449728 57449738 LBX2 JASPAR yes 55053822
chr17 57449728 57449738 LHX2 JASPAR yes 55053823
chr17 57449728 57449738 MIXL1 JASPAR yes 55053824
Genes associated with rs115878524[chr17:57449738], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More