EnhancerDB
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  3. rs115888407[chr3:58005410]
Enhancers that have rs115888407[chr3:58005410]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 57992811 58015944 enh20646
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Uterus Thyroid Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs115888407[chr3:58005410]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58005406 58005427 IRF1 JASPAR yes 2664979
chr3 58005408 58005419 FLI1 JASPAR yes 2664980
chr3 58005408 58005421 ELF3 JASPAR yes 2664981
chr3 58005409 58005420 ELF5 JASPAR yes 2664982
chr3 58005409 58005422 ELF1 JASPAR yes 2664983
chr3 58005409 58005423 SPI1 JASPAR yes 2664984
chr3 58005409 58005423 SPIC JASPAR yes 2664985
Genes associated with rs115888407[chr3:58005410], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More