EnhancerDB
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  3. rs115890869[chr1:27474592]
Enhancers that have rs115890869[chr1:27474592]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27456674 27477960 enh171
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs115890869[chr1:27474592]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27474588 27474602 RXRB JASPAR yes 27682152
chr1 27474588 27474602 RXRG JASPAR yes 27682153
chr1 27474588 27474603 NR2C2 JASPAR yes 27682154
Genes associated with rs115890869[chr1:27474592], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More