EnhancerDB
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  3. rs115895017[chr12:50919259]
Enhancers that have rs115895017[chr12:50919259]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs115895017[chr12:50919259]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50919248 50919263 STAT1 JASPAR yes 120838178
chr12 50919250 50919261 STAT1 JASPAR yes 120838179
chr12 50919256 50919273 PAX1 JASPAR yes 120838181
chr12 50919256 50919273 PAX9 JASPAR yes 120838182
chr12 50919258 50919272 PAX6 JASPAR yes 120838183
Genes associated with rs115895017[chr12:50919259], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More