EnhancerDB
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  3. rs115955852[chr1:225627560]
Enhancers that have rs115955852[chr1:225627560]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225626185 225658051 enh950
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs115955852[chr1:225627560]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225627090 225627916 ZNF274 GTRD no Bone Marrow (K562) 21384619
chr1 225627128 225627707 ZBTB33 GTRD no Brain (SK-N-SH) 21384620
chr1 225627546 225627560 POU1F1 JASPAR yes 35740127
chr1 225627547 225627560 POU3F3 JASPAR yes 35740128
chr1 225627548 225627560 POU2F1 JASPAR yes 35740130
Genes associated with rs115955852[chr1:225627560], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More